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bgruening/galaxy-rna-workbench:latest

Manifest digest

sha256:812600506f0903e9c04d60ffdc1c9f123ab80a90a330d09deccf95753ae91452

OS/ARCH

linux/amd64

Compressed size

6.48 GB

Last pushed

almost 7 years by bgruening

Type

Image

Manifest digest

sha256:812600506f0903e9c04d60ffdc1c9f123ab80a90a330d09deccf95753ae91452

Image Layers

Image Layers

1ADD file ... in / 69.68 MB
2/bin/sh -c set -xe &&70.95 KB
3/bin/sh -c rm -rf /var/lib/apt/lists/*630 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'853 B
5/bin/sh -c mkdir -p /run/systemd163 B
6CMD ["/bin/bash"]0 B
7MAINTAINER Björn A. Grüning,0 B
8ENV DEBIAN_FRONTEND=noninteractive0 B
9/bin/sh -c apt-get -qq update183.22 MB
10MAINTAINER Björn A. Grüning,0 B
11ARG GALAXY_RELEASE0 B
12ARG GALAXY_REPO0 B
13ENV GALAXY_RELEASE=release_19.01 GALAXY_REPO=https://github.com/galaxyproject/galaxy GALAXY_ROOT=/galaxy-central0 B
14ENV GALAXY_CONFIG_FILE=/etc/galaxy/galaxy.yml GALAXY_CONFIG_JOB_CONFIG_FILE=/etc/galaxy/job_conf.xml GALAXY_CONFIG_JOB_METRICS_CONFIG_FILE=/etc/galaxy/job_metrics_conf.xml0 B
15/bin/sh -c locale-gen en_US.UTF-8 &&831.19 KB
16/bin/sh -c groupadd -r postgres2.08 KB
17/bin/sh -c echo "force-unsafe-io" >292.52 MB
18/bin/sh -c groupadd -r $GALAXY_USER21.65 KB
19ADD file ... in /home/galaxy/.bashrc 1.7 KB
20/bin/sh -c wget --quiet https://repo.anaconda.com/miniconda/Miniconda2-4.5.12-Linux-x86_64.sh147.62 MB
21ADD file ... in /etc/galaxy/reports_wsgi.ini 1.51 KB
22ADD file ... in /home/galaxy/ephemeris/sample_tool_list.yaml 436 B
23ADD dir:e820d1e84bb6abf801edd5a30a211f65273921d4830d101c2b41e4a8d296b930 in /ansible/roles 49.2 KB
24ADD file ... in /ansible/provision.yml 219 B
25ADD file ... in /ansible/postgresql_provision.yml 350 B
26/bin/sh -c ansible-playbook /ansible/postgresql_provision.yml &&454.14 MB
27/bin/sh -c mkdir /shed_tools &&158.49 MB
28USER galaxy0 B
29WORKDIR /galaxy-central0 B
30ENV GALAXY_CONFIG_DATABASE_CONNECTION=postgresql://galaxy:galaxy@localhost:5432/galaxy?client_encoding=utf8 [email protected] GALAXY_CONFIG_MASTER_API_KEY=HSNiugRFvgT574F43jZ7N9F30 B
31ADD file ... in /etc/galaxy/web/welcome_image.png 49.55 KB
32ADD file ... in /etc/galaxy/web/welcome.html 1.07 KB
33/bin/sh -c ./scripts/common_startup.sh && 4.26 MB
34USER root0 B
35ADD file ... in /usr/local/bin/setup_postgresql.py 1.29 KB
36/bin/sh -c rm $PG_DATA_DIR_DEFAULT -rf7.41 MB
37ADD file ... in /home/galaxy/tool_sheds_conf.xml 355 B
38ADD file ... in /usr/bin/install-tools 784 B
39ADD file ... in /usr/bin/install-biojs 343 B
40/bin/sh -c chmod +x /usr/bin/install-tools6.22 KB
41/bin/sh -c echo "DISCARD_SESSION_KEYRING_ON_STARTUP=False" >230 B
42ENV GALAXY_CONFIG_INTEGRATED_TOOL_PANEL_CONFIG=/export/galaxy-central/integrated_tool_panel.xml0 B
43EXPOSE :210 B
44EXPOSE :800 B
45EXPOSE :4430 B
46EXPOSE :88000 B
47EXPOSE :90020 B
48VOLUME [/export/ /data/ /var/lib/docker]0 B
49ADD file ... in /usr/bin/install_db.sh 269 B
50/bin/sh -c chmod +x /usr/bin/install_db.sh334 B
51CMD ["/usr/bin/startup"]0 B
52MAINTAINER Björn A. Grüning,0 B
53ENV GALAXY_CONFIG_BRAND=NGS-preprocessing0 B
54COPY file:119c85acc817937c4b580959ed04d4fd047ec3e3cab6b17d2e581039e2749e9d in /galaxy-central/tools.yaml 1.3 KB
55/bin/sh -c install-tools $GALAXY_ROOT/tools.yaml &&1.54 GB
56MAINTAINER Björn A. Grüning,0 B
57ENV GALAXY_CONFIG_BRAND=RNA-Seq0 B
58ADD file ... in /galaxy-central/tools.yaml 1.29 KB
59/bin/sh -c install-tools $GALAXY_ROOT/tools.yaml &&1.91 GB
60MAINTAINER Björn A. Grüning,0 B
61ENV GALAXY_CONFIG_BRAND=RNA structural analysis0 B
62ADD file ... in /galaxy-central/tools.yaml 427 B
63/bin/sh -c install-tools $GALAXY_ROOT/tools.yaml &&761.11 MB
64MAINTAINER Björn A. Grüning,0 B
65ENV GALAXY_CONFIG_BRAND=RNA workbench0 B
66ADD file ... in /galaxy-central/tools.yaml 1.41 KB
67ADD file ... in /galaxy-central/tools_2.yaml 1.45 KB
68/bin/sh -c install-tools $GALAXY_ROOT/tools.yaml &&376.56 MB
69/bin/sh -c install-tools $GALAXY_ROOT/tools_2.yaml &&648.01 MB
70ADD multi:0810ba8e66154f9623d74be6bd80cf7e1aab36afdb388f9e6c2f5e8611de3493 in /galaxy-central/config/plugins/tours/ 15.58 KB
71ADD file ... in /galaxy-central/library_data.yaml 462 B
72ADD multi:1b69acdb9b770038680104a1ea6e5b8eda87086a4d0badc8e273c4baabcbb396 in /home/galaxy/workflows/ 19.43 KB
73ENV GALAXY_CONFIG_TOOL_PATH=/galaxy-central/tools/0 B
74/bin/sh -c curl -sL https://github.com/bgruening/galaxytools/archive/master.tar.gz3.82 KB
75ADD file ... in /etc/galaxy/web/welcome_image.png 74.23 KB
76ADD file ... in /etc/galaxy/web/welcome.html 1.07 KB

Command

ADD file:6eca4ad395f3f9986f9edf8cc1cc454f7247e63f18bdd8bdb914537ef55b9c88 in /