Sign inSign up

biocontainers/fastqc:v0.11.5_cv1

Machine learning & AI
Data science
Manifest digest

sha256:b99c01625d922cc1ab1b24b94e6a813e1bf9add99af4c525a2fc21638df89565

OS/ARCH

linux/amd64

Compressed size

399.74 MB

Last pushed

over 8 years by biocontainersci

Type

Image

Manifest digest

sha256:b99c01625d922cc1ab1b24b94e6a813e1bf9add99af4c525a2fc21638df89565

Image Layers

Image Layers

1ADD file ... in / 40.97 MB
2/bin/sh -c set -xe &&847 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*620 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'854 B
5/bin/sh -c mkdir -p /run/systemd169 B
6CMD ["/bin/bash"]0 B
7LABEL base.image=ubuntu:16.040 B
8LABEL version=40 B
9LABEL software=Biocontainers base Image0 B
10LABEL software.version=082520160 B
11LABEL description=Base image for0 B
12LABEL website=http://biocontainers.pro0 B
13LABEL documentation=https://github.com/BioContainers/specs/wiki0 B
14LABEL license=https://github.com/BioContainers/containers/blob/master/LICENSE0 B
15LABEL tags=Genomics,Proteomics,Transcriptomics,General,Metabolomics0 B
16MAINTAINER Felipe da Veiga0 B
17ENV DEBIAN_FRONTEND=noninteractive0 B
18/bin/sh -c mv /etc/apt/sources.list /etc/apt/sources.list.bkp956 B
19/bin/sh -c apt-get clean all243.82 MB
20/bin/sh -c echo 'export PATH=/opt/conda/bin:$PATH'31.14 MB
21/bin/sh -c TINI_VERSION=`curl https://github.com/krallin/tini/releases/latest |579.54 KB
22/bin/sh -c mkdir /data /config112 B
23/bin/sh -c groupadd fuse &&4.64 KB
24/bin/sh -c chmod 777 -R31.14 MB
25USER [biodocker]0 B
26ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin0 B
27ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/home/biodocker/bin0 B
28ENV HOME=/home/biodocker0 B
29/bin/sh -c mkdir /home/biodocker/bin142 B
30/bin/sh -c conda config --add7.3 KB
31/bin/sh -c conda config --add229 B
32/bin/sh -c conda upgrade conda41.97 MB
33VOLUME [/data /config]0 B
34CMD ["/bin/bash"]0 B
35WORKDIR /data0 B
36LABEL base_image=biocontainers:latest0 B
37LABEL version=10 B
38LABEL software=FASTQC0 B
39LABEL software.version=0.11.50 B
40LABEL about.summary=A quality control0 B
41LABEL about.home=http://www.bioinformatics.babraham.ac.uk/projects/fastqc/0 B
42LABEL about.documentation=http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/0 B
43LABEL about.license_file=https://www.gnu.org/copyleft/gpl.html0 B
44LABEL about.license=SPDX:GPL-3.00 B
45LABEL extra.identifiers.biotools=fastqc0 B
46LABEL about.tags=General0 B
47MAINTAINER Alicia Mastretta-Yanes <[email protected]>0 B
48USER [root]0 B
49ENV DST=/tmp0 B
50ENV URL=https://github.com/agordon/libgtextutils/releases/download/0.7/0 B
51/bin/sh -c wget $URL/libgtextutils-0.7.tar.gz -O95.36 KB
52ENV URL=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/0 B
53/bin/sh -c wget $URL/fastx_toolkit-0.0.14.tar.bz2 -O566.79 KB
54/bin/sh -c ldconfig9.44 KB
55ENV URL=http://www.bioinformatics.babraham.ac.uk/projects/fastqc/0 B
56ENV ZIP=fastqc_v0.11.5.zip0 B
57/bin/sh -c wget $URL/$ZIP -O9.47 MB
58ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/home/biodocker/bin0 B
59USER [biodocker]0 B
60CMD ["/bin/sh" "-c" "fastqc"]0 B
61WORKDIR /data/0 B

Command

ADD file:c753df38640ab6e246d9e66f0cef7156b7003976080b1e0b83e5717cd6ef1725 in /