broadinstitute/fungal_gatk4:gatk4.2.4.1

Manifest digest

sha256:df8bb9a53485a12f8a3de48370dfe3b2f5710945166b985f29f46e58c369df4c

OS/ARCH

linux/amd64

Compressed size

1.05 GB

Last pushed

over 2 years by ncauldronbroad

Type

Image

Manifest digest

sha256:df8bb9a53485a12f8a3de48370dfe3b2f5710945166b985f29f46e58c369df4c

Image Layers

1ADD file ... in / 52.37 MB

2CMD ["bash"]0 B

3/bin/sh -c set -eux; apt-get4.91 MB

4/bin/sh -c set -ex; if10.37 MB

5/bin/sh -c set -eux; apt-get5.39 MB

6ENV JAVA_HOME=/usr/local/openjdk-80 B

7/bin/sh -c { echo '#/bin/sh';213 B

8ENV PATH=/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

9ENV LANG=C.UTF-80 B

10ENV JAVA_VERSION=8u3120 B

11/bin/sh -c set -eux; arch="$(dpkg39.46 MB

12ENV TERM=xterm-256color0 B

13LABEL SAMTOOLS_VER=1.100 B

14LABEL BWA_VER=0.7.170 B

15LABEL GATK_VER=4.2.4.10 B

16LABEL [email protected]0 B

17RUN /bin/sh -c apt-get update395.52 MB

18RUN /bin/sh -c echo 'install.packages(c("ggplot2"),97.18 MB

19RUN /bin/sh -c cd /opt11.88 MB

20RUN /bin/sh -c cd /opt11.89 MB

21RUN /bin/sh -c cd /opt3.76 MB

22ENV PATH=/opt/bwa:/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

23RUN /bin/sh -c cd /opt441.7 MB

24

ENV PATH=/opt/gatk-4.2.4.1:/opt/bwa:/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

Command

ADD file:c03517c5ddbed4053165bfdf984b27a006fb5f533ca80b5798232d96df221440 in /