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jonnsmith/gatk_test_builds:2019-03-08-4.1.0.0-SNAPSHOT

Manifest digest

sha256:ec619625f85177df0187c7ef7a40033dec6a22e65979d7af3d5b7dea06c7d810

OS/ARCH

linux/amd64

Compressed size

1.4 GB

Last pushed

over 7 years by jonnsmith

Type

Image

Manifest digest

sha256:ec619625f85177df0187c7ef7a40033dec6a22e65979d7af3d5b7dea06c7d810

Image Layers

Image Layers

1ADD file ... in / 45.41 MB
2/bin/sh -c set -xe &&850 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*618 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'851 B
5/bin/sh -c mkdir -p /run/systemd168 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update &&0 B
8/bin/sh -c export CLOUD_SDK_REPO="cloud-sdk-$(lsb_release -c0 B
9ENV HOME=/root0 B
10WORKDIR /root0 B
11CMD ["bash"]0 B
12ENV JAVA_LIBRARY_PATH=/usr/lib/jni0 B
13ENV JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64/0 B
14/bin/sh -c java -version0 B
15/bin/sh -c apt-key adv --keyserver0 B
16COPY file:76eacfefaa9dbb52ef03010c3ca47ca8b50456cd628a6b5b1064807a11e2a706 in install_R_packages.R 0 B
17/bin/sh -c Rscript install_R_packages.R0 B
18/bin/sh -c rm -rf /var/lib/apt/lists/*0 B
19384.52 MB
20ARG ZIPPATH0 B
21ADD dir:163da59197b3672a687f683fedc7d45700c99a599f2f3a97f76ab07d8b582e1c in /gatk 376.82 MB
22WORKDIR /gatk0 B
23|1 ZIPPATH=./unzippedJar /bin/sh -c ln160 B
24|1 ZIPPATH=./unzippedJar /bin/sh -c ln161 B
25|1 ZIPPATH=./unzippedJar /bin/sh -c ln159 B
26WORKDIR /root0 B
27|1 ZIPPATH=./unzippedJar /bin/sh -c java134 B
28|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir108 B
29|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir93 B
30|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir121 B
31WORKDIR /gatk0 B
32ENV CI=true0 B
33|1 ZIPPATH=./unzippedJar /bin/sh -c echo422 B
34WORKDIR /root0 B
35|1 ZIPPATH=./unzippedJar /bin/sh -c cp422 B
36|1 ZIPPATH=./unzippedJar /bin/sh -c cp161 B
37ENV CLASSPATH=/gatk/gatk.jar:0 B
38|1 ZIPPATH=./unzippedJar /bin/sh -c cp865 B
39ENV DOWNLOAD_DIR=/downloads0 B
40ENV CONDA_URL=https://repo.continuum.io/miniconda/Miniconda3-4.3.30-Linux-x86_64.sh0 B
41ENV CONDA_MD5== 0b80a152332a4ce5250f3c09589c7a810 B
42ENV CONDA_PATH=/opt/miniconda0 B
43|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir129.48 MB
44WORKDIR /gatk0 B
45ENV PATH=/opt/miniconda/envs/gatk/bin:/opt/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
46|1 ZIPPATH=./unzippedJar /bin/sh -c conda497.77 MB
47CMD ["bash" "--init-file" "/gatk/gatkenv.rc"]0 B
48ENV PATH=/gatk:/opt/miniconda/envs/gatk/bin:/opt/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

Command

ADD file:5b334adf9d9a2256add2a801b49d4b23c93b0973ec22bb798973d571c948f102 in /