nanozoo/detonate:1.11--9168b7e

Integration & delivery

Machine learning & AI

Data science

Manifest digest

sha256:7a4bab96c3183868efc99efd1c8a1165a5b9ca3ae51e81009f415d37f3855c93

OS/ARCH

linux/amd64

Compressed size

493.08 MB

Last pushed

almost 7 years by nanozoo

Type

Image

Manifest digest

sha256:7a4bab96c3183868efc99efd1c8a1165a5b9ca3ae51e81009f415d37f3855c93

Image Layers

Image Layers

1ADD file ... in / 25.84 MB

2CMD ["bash"]0 B

3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

4ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

5/bin/sh -c apt-get update --fix-missing76.37 MB

6/bin/sh -c wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-4.7.12-Linux-x86_64.sh48.8 MB

7CMD ["/bin/bash"]0 B

8ENV VERSION=1.110 B

9/bin/sh -c apt update &&112.65 MB

10/bin/sh -c apt-get update &&68.91 MB

11/bin/sh -c wget http://deweylab.biostat.wisc.edu/detonate/detonate-${VERSION}-precompiled.tar.gz20.01 MB

12/bin/sh -c tar -zxvf detonate-${VERSION}-precompiled.tar.gz20.11 MB

13/bin/sh -c rm detonate-1.11-precompiled.tar.gz122 B

14ENV PATH=/detonate-1.11-precompiled/ref-eval:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

15

ENV PATH=/detonate-1.11-precompiled/rsem-eval:/detonate-1.11-precompiled/ref-eval:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

16/bin/sh -c conda config --add176 B

17/bin/sh -c conda install samtools=1.944.09 MB

18/bin/sh -c git clone https://github.com/deweylab/RSEM.git60.86 MB

19/bin/sh -c cd RSEM &&15.45 MB

Command

ADD file:1901172d26545609083e48b9bfaf2cb46674f37af0902ad5a32e2420301225de in /