ncauldronbroad/fungal_gatk4:temurin17

Manifest digest

sha256:449073f3d801c2dcf1bb49104a6c7e338109a3d0690eb2af35b27a8b923e4da6

OS/ARCH

linux/amd64

Compressed size

1.27 GB

Last pushed

over 2 years by ncauldronbroad

Type

Image

Manifest digest

sha256:449073f3d801c2dcf1bb49104a6c7e338109a3d0690eb2af35b27a8b923e4da6

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 29.03 MB

6CMD ["/bin/bash"]0 B

7ENV JAVA_HOME=/opt/java/openjdk0 B

8ENV PATH=/opt/java/openjdk/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

9ENV LANG=en_US.UTF-8 LANGUAGE=en_US:en LC_ALL=en_US.UTF-80 B

10RUN /bin/sh -c set -eux;12.31 MB

11ENV JAVA_VERSION=jdk-17.0.10+70 B

12RUN /bin/sh -c set -eux;44.98 MB

13RUN /bin/sh -c set -eux;160 B

14COPY entrypoint.sh /__cacert_entrypoint.sh # buildkit731 B

15ENTRYPOINT ["/__cacert_entrypoint.sh"]0 B

16ENV TERM=xterm-256color0 B

17LABEL SAMTOOLS_VER=1.200 B

18LABEL BCFTOOLS_VER=1.200 B

19LABEL BWA_VER=0.7.170 B

20LABEL GATK_VER=4.5.0.00 B

21LABEL [email protected]0 B

22ENV DEBIAN_FRONTEND=noninteractive0 B

23RUN /bin/sh -c apt-get update398.1 MB

24RUN /bin/sh -c echo 'install.packages(c("remotes"),33.86 MB

25RUN /bin/sh -c echo 'remotes::install_cran("ggplot2")'13.72 MB

26RUN /bin/sh -c echo 'remotes::install_cran(c("readr",20.83 MB

27RUN /bin/sh -c cd /opt18.84 MB

28RUN /bin/sh -c cd /opt19.34 MB

29RUN /bin/sh -c cd /opt3.95 MB

30ENV PATH=/opt/bwa:/opt/java/openjdk/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

31RUN /bin/sh -c cd /opt706.45 MB

32ENV PATH=/opt/gatk-4.5.0.0:/opt/bwa:/opt/java/openjdk/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

Command

 ARG RELEASE