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obiba/opal-rserver:snapshot

Security
Languages & frameworks
Data science
Manifest digest

sha256:d18e0c781bb6af746898ded32e68653ce858af67306a35ca804f75090e3a0d28

OS/ARCH

linux/amd64

Compressed size

2.42 GB

Last pushed

over 5 years by obiba

Type

Image

Manifest digest

sha256:d18e0c781bb6af746898ded32e68653ce858af67306a35ca804f75090e3a0d28

Image Layers

Image Layers

1ADD file ... in / 48.06 MB
2CMD ["bash"]0 B
3/bin/sh -c apt-get update &&7.45 MB
4/bin/sh -c set -ex; if9.53 MB
5/bin/sh -c set -eux; apt-get5.27 MB
6ENV LANG=C.UTF-80 B
7ENV JAVA_HOME=/usr/local/openjdk-80 B
8ENV PATH=/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
9/bin/sh -c { echo '#/bin/sh';208 B
10ENV JAVA_VERSION=8u2720 B
11/bin/sh -c set -eux; arch="$(dpkg39.37 MB
12LABEL OBiBa=<[email protected]>0 B
13ENV LANG=C.UTF-80 B
14ENV LANGUAGE=C.UTF-80 B
15ENV LC_ALL=C.UTF-80 B
16/bin/sh -c echo 'deb http://cran.r-project.org/bin/linux/debian246.66 MB
17/bin/sh -c DEBIAN_FRONTEND=noninteractive apt-get install384.26 MB
18/bin/sh -c Rscript -e "install.packages(c('opalr',226 MB
19/bin/sh -c Rscript -e "install.packages('unixtools',34.08 KB
20LABEL OBiBa=<[email protected]>0 B
21ENV LANG=C.UTF-80 B
22ENV LANGUAGE=C.UTF-80 B
23ENV LC_ALL=C.UTF-80 B
24ENV RSERVER_HOME=/srv0 B
25ENV JAVA_OPTS=-Xmx2G0 B
26ENV RSERVER_ADMIN_VERSION=1.6.00 B
27ENV RSERVE_VERSION=1.8-70 B
28ENV RSERVE_PORT_MIN=530000 B
29ENV RSERVE_PORT_MAX=532000 B
30/bin/sh -c set -x &&29 MB
31/bin/sh -c wget -q https://www.rforge.net/Rserve/snapshot/Rserve_${RSERVE_VERSION}.tar.gz2.32 MB
32COPY file:97898f07a3db264695be73ae1f15781d8ebd068871460aa7f0503b7bad9951c8 in /usr/local/bin/ 879.14 KB
33/bin/sh -c chmod +x /usr/share/rserver/bin/rserver904 B
34COPY dir:120165ce671bc4884ae7c917832b063fa8ee21f786eb28dbc77f5ec1bdebc391 in /opt/obiba/bin 303 B
35COPY file:b80addd139f3e7e883e65d9f245a00e9d39cbcf8a9c5fc7a1af2f00bee50b394 in /usr/share/rserver/conf/Rserv.conf 481 B
36COPY file:2f8ac4bebd6305bc9abb66c467c0c333395cb5bde8ce2fd4255ec5e1bddee44b in /usr/share/rserver/conf/Rprofile.R 374 B
37/bin/sh -c mkdir -p $RSERVER_HOME/conf1.14 KB
38/bin/sh -c adduser --system --home1.31 KB
39/bin/sh -c chmod +x -R1.33 KB
40/bin/sh -c chown -R rserver:adm310 B
41/bin/sh -c apt-get update &&91.95 MB
42/bin/sh -c Rscript -e "update.packages(ask49.46 MB
43/bin/sh -c Rscript -e "install.packages(c('gh',119.23 MB
44/bin/sh -c Rscript -e "BiocManager::install(c('Biobase','GWASTools',1.11 GB
45/bin/sh -c Rscript -e "devtools::install_github('perishky/meffil',86.08 MB
46VOLUME [/srv]0 B
47EXPOSE 6311 63120 B
48EXPOSE 53000-532000 B
49COPY file:01a9dd0ec3de241789f56144430177cc6f8116f6df0cbc886a8751b3a63a40b5 in / 232 B
50ENTRYPOINT ["/docker-entrypoint.sh"]0 B
51CMD ["app"]0 B

Command

ADD file:6627ad39ea0cb9fcb212342326d14efaff51aece1fd0dc16d5bbcaa25d858622 in /