sapiosciences/sapio_analytics_server:24.5

Manifest digest

sha256:a24acaa96c69c7cf3f62f1cc5425d4acaf3bb30d9d30cea2f9ff7f642cabcd06

OS/ARCH

linux/amd64

Compressed size

6.34 GB

Last pushed

about 2 years by sapioyechenqiao

Type

Image

Manifest digest

sha256:a24acaa96c69c7cf3f62f1cc5425d4acaf3bb30d9d30cea2f9ff7f642cabcd06

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 28.17 MB

6CMD ["/bin/bash"]0 B

7LABEL [email protected]0 B

8ARG USERNAME=sapio0 B

9ARG BOWTIE_DATA_DIR=/data/fasta0 B

10ARG BOWTIE_INDEX_DIR=/data/indexes0 B

11ARG IGBLAST_DIR=/opt/sapiosciences/igBlast0 B

12ARG IGBLAST_VERSION=1.21.00 B

13ARG ORF_FINDER_DIR=/opt/sapiosciences/orf0 B

14ARG R_TRANSLATOR_DIR=/opt/sapiosciences/rtranslator0 B

15ARG ARCH=x86_640 B

16ENV SAPIO_EXEC_SERVER_API_KEY=Vi6ZGDqhKBieLcDWrNtDpDcmKeNptXZE766Tc4NFCGg4tPgXbq3JmLj3XW7fpopUngv3KEDe69KuhSxEJL40 B

17ENV TZ=EST5EDT0 B

18RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes190 B

19RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes581.75 MB

20SHELL [/bin/bash -c]0 B

21WORKDIR /data/fasta112 B

22RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes925.86 MB

23RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes191 B

24RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes2.86 GB

25RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes6.22 MB

26COPY scripts/install.R /opt/scripts/install.R # buildkit411 B

27RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes411 B

28RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes259.8 MB

29RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes483.56 MB

30RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes1.98 KB

31RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes162 B

32WORKDIR /opt/sapiosciences/igBlast32 B

33RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes42.66 MB

34WORKDIR /opt/sapiosciences/orf32 B

35RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes8.15 MB

36WORKDIR /home/sapio115 B

37RUN |8 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes120 B

38ARG MINOFORGE_DIR=/home/sapio/miniforge-pypy30 B

39ARG INDIGO_WHL_FILENAME=epam.indigo-1.12.2-py3-none-manylinux1_x86_64.whl0 B

40USER root0 B

41COPY packages/bingo_elastic /home/sapio/bingo_elastic # buildkit105.65 KB

42

COPY packages/epam.indigo-1.12.2-py3-none-manylinux1_x86_64.whl /home/sapio/epam.indigo-1.12.2-py3-none-manylinux1_x86_64.whl # buildkit

26.33 MB

43RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes105.68 KB

44RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes26.33 MB

45USER sapio0 B

46RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes182.29 MB

47RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes13.81 KB

48RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes167.92 MB

49RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes449 B

50RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes2.1 KB

51WORKDIR /home/sapio/bingo_elastic32 B

52RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes412.88 MB

53RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes27.13 MB

54RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes2.34 MB

55RUN |10 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes29.3 MB

56ARG SAPIO_PY_COMMONS_VERSION=2024.5.16a2270 B

57ARG SAPIO_PY_LIB_VERSION=2024.5.16rc2040 B

58RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes269.98 MB

59USER root0 B

60RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes32 B

61COPY packages/r-translator /opt/sapiosciences/rtranslator/ # buildkit29.94 MB

62COPY packages/sapioRlib.zip /root/sapioRlib/sapioRlib.zip # buildkit4.35 KB

63COPY scripts/installRLibFromSrc.R /root/sapioRlib/installRLibFromSrc.R # buildkit209 B

64RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes22.72 MB

65WORKDIR /root/sapioRlib32 B

66RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes29.94 MB

67RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes3.82 KB

68RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes32.63 KB

69COPY execserver /home/sapio/execserver # buildkit471.09 KB

70RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes471.1 KB

71RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes2.67 KB

72RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes718.47 KB

73USER sapio0 B

74WORKDIR /home/sapio/execserver32 B

75RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes402 B

76RUN |12 USERNAME=sapio BOWTIE_DATA_DIR=/data/fasta BOWTIE_INDEX_DIR=/data/indexes32 B

77VOLUME [/data]0 B

78EXPOSE map[8686/tcp:{}]0 B

79HEALTHCHECK &{["CMD-SHELL" "lsof -i:8686"] "10s"0 B

80CMD ["/bin/bash" "-c" "bash run.sh"]0 B

Command

 ARG RELEASE