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virtualflybrain/pipeline:pipeline2

Manifest digest

sha256:c4f709dac06959fae4a73251e0e4edde49e1a31fc0a49a0d1b60a0f76de2fa41

OS/ARCH

linux/amd64

Compressed size

873.95 MB

Last pushed

almost 6 years by virtualflybrain

Type

Image

Manifest digest

sha256:c4f709dac06959fae4a73251e0e4edde49e1a31fc0a49a0d1b60a0f76de2fa41

Image Layers

Image Layers

1ADD file ... in / 48.06 MB
2CMD ["bash"]0 B
3/bin/sh -c apt-get update &&7.45 MB
4/bin/sh -c set -ex; if9.53 MB
5/bin/sh -c apt-get update &&49.43 MB
6/bin/sh -c set -ex; apt-get183.36 MB
7ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
8ENV LANG=C.UTF-80 B
9/bin/sh -c apt-get update &&5.86 MB
10ENV GPG_KEY=0D96DF4D4110E5C43FBFB17F2D347EA6AA65421D0 B
11ENV PYTHON_VERSION=3.6.120 B
12/bin/sh -c set -ex &&14.84 MB
13/bin/sh -c cd /usr/local/bin &&232 B
14ENV PYTHON_PIP_VERSION=20.2.40 B
15ENV PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/8283828b8fd6f1783daf55a765384e6d8d2c5014/get-pip.py0 B
16ENV PYTHON_GET_PIP_SHA256=2250ab0a7e70f6fd22b955493f7f5cf1ea53e70b584a84a32573644a045b4bfb0 B
17/bin/sh -c set -ex; wget2.02 MB
18CMD ["python3"]0 B
19VOLUME [/logs]0 B
20ENV WORKSPACE=/opt/VFB0 B
21ENV VFB_OWL_VERSION=Current0 B
22ENV CHUNK_SIZE=10000 B
23ENV PING_SLEEP=120s0 B
24ENV BUILD_OUTPUT=/opt/VFB/build.out0 B
25ENV RUN_add_refs_for_anat=true0 B
26ENV RUN_import_pub_data=true0 B
27ENV RUN_make_named_edges=false0 B
28ENV RUN_KB2Prod=false0 B
29ENV RUN_add_constraints_and_redundant_labels=false0 B
30ENV RUN_Owl2neolabels=false0 B
31ENV RUN_expand_xrefs=true0 B
32/bin/sh -c pip3 install wheel1.92 MB
33/bin/sh -c pip3 install requests1.39 MB
34/bin/sh -c pip3 install psycopg21.75 MB
35/bin/sh -c pip3 install pandas52.98 MB
36/bin/sh -c apt-get -qq update414.26 MB
37ENV KBSERVER=http://kb.p2.virtualflybrain.org0 B
38ENV PDBSERVER=http://pdb.p2.virtualflybrain.org0 B
39ENV OWLSERVER=http://owl.p2.virtualflybrain.org0 B
40ENV PDBuser=neo4j0 B
41ENV PDBpassword=password0 B
42ENV KBuser=neo4j0 B
43ENV KBpassword=password0 B
44COPY file:7d0cacb2fe2d8f60742dc1c6f3d910992c584482352b75c47fe9183888426f69 in /opt/VFB/process.sh 704 B
45COPY file:d9c469c7dd23ae186a29b424d6969bf06cd6aaaafb999ccda59fd87888002cc5 in /opt/VFB/runsilent.sh 640 B
46/bin/sh -c chmod +x /opt/VFB/*.sh1.13 KB
47/bin/sh -c echo -e "travis_fold:start:processLoad"69.09 MB
48/bin/sh -c pip3 install -r9.91 MB
49/bin/sh -c cd "${WORKSPACE}" &&2.09 MB
50/bin/sh -c pip3 install -r92 B
51/bin/sh -c cd ${WORKSPACE} &&0 B
52/bin/sh -c echo -e "travis_fold:start:sourcetree"0 B
53ENV PYTHONPATH=/opt/VFB/VFB_neo4j/src/:/opt/VFB/VFB_connect/src/0 B
54CMD ["/opt/VFB/process.sh"]0 B

Command

ADD file:6627ad39ea0cb9fcb212342326d14efaff51aece1fd0dc16d5bbcaa25d858622 in /