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wurmlab/sequenceserver:v3.2.0

Integration & delivery
Data science
Web servers
Index digest

sha256:03fe0e8890967ff1502a5a32841d55b17a50d6724318cdd1b92724e9849c6ad0

OS/ARCH

linux/amd64

Compressed size

541.02 MB

Last pushed

12 days by yannickwurm

Type

Image

Manifest digest

sha256:a2fe64028c1bb4ab544a44435a36a2ec41319a769b2d68b12d9e9658e66ef1ac

Image Layers

Image Layers

1# debian.sh --arch 'amd64' out/46.27 MB
2RUN /bin/sh -c set -eux;22.77 MB
3RUN /bin/sh -c set -eux;61.44 MB
4RUN /bin/sh -c set -ex;201.95 MB
5RUN /bin/sh -c set -eux;189 B
6ENV LANG=C.UTF-80 B
7ENV RUBY_VERSION=3.3.130 B
8ENV RUBY_DOWNLOAD_URL=https://cache.ruby-lang.org/pub/ruby/3.3/ruby-3.3.13.tar.xz0 B
9ENV RUBY_DOWNLOAD_SHA256=6bd764359992373a96556b45fb7dfe6b6170da34a0a2fd0b7e1be7932fea982b0 B
10RUN /bin/sh -c set -eux;36.13 MB
11ENV GEM_HOME=/usr/local/bundle0 B
12ENV BUNDLE_SILENCE_ROOT_WARNING=1 BUNDLE_APP_CONFIG=/usr/local/bundle0 B
13ENV PATH=/usr/local/bundle/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
14RUN /bin/sh -c set -eux;142 B
15CMD ["irb"]0 B
16LABEL Description=Intuitive local web frontend0 B
17LABEL MailingList=https://groups.google.com/forum/#!forum/sequenceserver0 B
18LABEL Website=http://sequenceserver.com0 B
19RUN /bin/sh -c apt-get update2.37 KB
20COPY /usr/local/bundle/ /usr/local/bundle/ # buildkit4.87 MB
21COPY /blast/bin/blast_formatter /blast/bin/blastdbcmd /blast/bin/blastn /blast/bin/blastp91.54 MB
22ENV PATH=/blast/bin:/usr/local/bundle/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
23WORKDIR /sequenceserver104 B
24RUN /bin/sh -c mkdir /db94 B
25EXPOSE [4567/tcp]0 B
26COPY . . # buildkit76.04 MB
27RUN /bin/sh -c mkdir -p388 B
28RUN /bin/sh -c mkdir -p160 B
29ENV PATH=/sequenceserver/bin:/blast/bin:/usr/local/bundle/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
30ENTRYPOINT ["bundle" "exec"]0 B
31CMD ["sequenceserver"]0 B
32VOLUME [/db]0 B

Command

# debian.sh --arch 'amd64' out/ 'bookworm' '@1792531975'