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bgruening/galaxy-genome-annotation:latest

Manifest digest

sha256:5d656ca33d4a9e01b7dd1286f55c43ecfe0503be5c3c96b7ed6532046ccc67f3

OS/ARCH

linux/amd64

Compressed size

3.77 GB

Last pushed

over 7 years by bgruening

Type

Image

Manifest digest

sha256:5d656ca33d4a9e01b7dd1286f55c43ecfe0503be5c3c96b7ed6532046ccc67f3

Image Layers

Image Layers

1ADD file ... in / 69.68 MB
2/bin/sh -c set -xe &&70.95 KB
3/bin/sh -c rm -rf /var/lib/apt/lists/*630 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'853 B
5/bin/sh -c mkdir -p /run/systemd163 B
6CMD ["/bin/bash"]0 B
7MAINTAINER Björn A. Grüning,0 B
8ENV DEBIAN_FRONTEND=noninteractive0 B
9/bin/sh -c apt-get -qq update183.22 MB
10MAINTAINER Björn A. Grüning,0 B
11ARG GALAXY_RELEASE0 B
12ARG GALAXY_REPO0 B
13ENV GALAXY_RELEASE=release_19.01 GALAXY_REPO=https://github.com/galaxyproject/galaxy GALAXY_ROOT=/galaxy-central0 B
14ENV GALAXY_CONFIG_FILE=/etc/galaxy/galaxy.yml GALAXY_CONFIG_JOB_CONFIG_FILE=/etc/galaxy/job_conf.xml GALAXY_CONFIG_JOB_METRICS_CONFIG_FILE=/etc/galaxy/job_metrics_conf.xml0 B
15/bin/sh -c locale-gen en_US.UTF-8 &&831.21 KB
16/bin/sh -c groupadd -r postgres2.08 KB
17/bin/sh -c echo "force-unsafe-io" >292.56 MB
18/bin/sh -c groupadd -r $GALAXY_USER21.69 KB
19ADD file ... in /home/galaxy/.bashrc 1.7 KB
20/bin/sh -c wget --quiet https://repo.anaconda.com/miniconda/Miniconda2-4.5.12-Linux-x86_64.sh147.74 MB
21ADD file ... in /etc/galaxy/reports_wsgi.ini 1.51 KB
22ADD file ... in /home/galaxy/ephemeris/sample_tool_list.yaml 463 B
23ADD dir:6215e17675c1f0bd49098749fd53a5ae2091cee132a5910dd1b69eb8a4ac6002 in /ansible/roles 49.19 KB
24ADD file ... in /ansible/provision.yml 222 B
25ADD file ... in /ansible/postgresql_provision.yml 352 B
26/bin/sh -c ansible-playbook /ansible/postgresql_provision.yml &&456.46 MB
27/bin/sh -c mkdir /shed_tools &&158.6 MB
28USER [galaxy]0 B
29WORKDIR /galaxy-central0 B
30ENV GALAXY_CONFIG_DATABASE_CONNECTION=postgresql://galaxy:galaxy@localhost:5432/galaxy?client_encoding=utf8 [email protected] GALAXY_CONFIG_MASTER_API_KEY=HSNiugRFvgT574F43jZ7N9F30 B
31ADD file ... in /etc/galaxy/web/welcome_image.png 49.55 KB
32ADD file ... in /etc/galaxy/web/welcome.html 1.07 KB
33/bin/sh -c ./scripts/common_startup.sh && 4.26 MB
34USER [root]0 B
35ADD file ... in /usr/local/bin/setup_postgresql.py 1.29 KB
36/bin/sh -c rm $PG_DATA_DIR_DEFAULT -rf7.21 MB
37ADD file ... in /home/galaxy/tool_sheds_conf.xml 357 B
38ADD file ... in /usr/bin/install-tools 789 B
39ADD file ... in /usr/bin/install-biojs 346 B
40/bin/sh -c chmod +x /usr/bin/install-tools6.22 KB
41/bin/sh -c echo "DISCARD_SESSION_KEYRING_ON_STARTUP=False" >232 B
42ENV GALAXY_CONFIG_INTEGRATED_TOOL_PANEL_CONFIG=/export/galaxy-central/integrated_tool_panel.xml0 B
43EXPOSE 21/tcp0 B
44EXPOSE 80/tcp0 B
45EXPOSE 443/tcp0 B
46EXPOSE 8800/tcp0 B
47EXPOSE 9002/tcp0 B
48VOLUME [/export/ /data/ /var/lib/docker]0 B
49ADD file ... in /usr/bin/install_db.sh 269 B
50/bin/sh -c chmod +x /usr/bin/install_db.sh377 B
51CMD ["/usr/bin/startup"]0 B
52MAINTAINER Galaxy Genome Annotation0 B
53WORKDIR /galaxy-central0 B
54ENV GALAXY_CONFIG_CONDA_AUTO_INSTALL=True GALAXY_CONFIG_CONDA_AUTO_INIT=True ENABLE_TTS_INSTALL=True0 B
55ADD file ... in /bin/postinst 223 B
56/bin/sh -c postinst6.01 MB
57COPY file:429986ca5634635b964c9b4c22f0784e839318768ee3720b5797e029b153b9bd in /galaxy-central/tools_1.yaml 1.19 KB
58COPY file:006eff5ee39dff523ecef9c6a82cdd197c8c4550284cd69582942500b1c9676f in /galaxy-central/tools_2.yaml 1.16 KB
59COPY file:9fd67c79be699cc8a611029fd41f30c370dbb89861a0c6521ef513f8081bc44d in /galaxy-central/tools_3.yaml 1.35 KB
60COPY file:cf8e27de56d1571976949ba43f13078c41af81babd32d108eb535422ed34f7c9 in /etc/config/gga_tool_conf.xml 231 B
61/bin/sh -c df -h &&809.76 MB
62/bin/sh -c df -h &&735.44 MB
63/bin/sh -c df -h &&988.76 MB
64ENV GALAXY_CONFIG_TOOL_CONFIG_FILE=config/tool_conf.xml.sample,config/shed_tool_conf.xml,/etc/config/gga_tool_conf.xml0 B
65ADD file ... in /etc/galaxy/web/welcome.html 1.21 KB
66/bin/sh -c mkdir -p /apollo-data154 B
67VOLUME [/export/ /apollo-data/ /jbrowse/data/0 B
68ADD file ... in /bin/fix_perms 352 B
69ADD file ... in /etc/supervisor/conf.d/apollo.conf 303 B
70ENV GALAXY_WEBAPOLLO_URL=http://apollo:8080/apollo [email protected] GALAXY_WEBAPOLLO_PASSWORD=password0 B

Command

ADD file:6eca4ad395f3f9986f9edf8cc1cc454f7247e63f18bdd8bdb914537ef55b9c88 in /