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bryce911/rqc-pipeline:20221212

Manifest digest

sha256:d71c765f60ff2ab5cc2511beb0eaddeb0e6910253b00b91b40c13184f9059af8

OS/ARCH

linux/amd64

Compressed size

2.58 GB

Last pushed

almost 4 years by bryce911

Type

Image

Manifest digest

sha256:d71c765f60ff2ab5cc2511beb0eaddeb0e6910253b00b91b40c13184f9059af8

Image Layers

Image Layers

1ADD file ... in / 79.65 MB
2LABEL org.label-schema.schema-version=1.0 org.label-schema.name=CentOS Base0 B
3CMD ["/bin/bash"]0 B
4MAINTAINER Bryce Foster <[email protected]>0 B
5ARG BBV=38.230 B
6ENV BBV=39.010 B
7ARG SAMV=1.150 B
8ENV SAMV=1.150 B
9ARG SAMBAMBAV=0.8.10 B
10ENV SAMBAMBAV=0.8.10 B
11/bin/sh -c cd /etc/yum.repos.d/ &&65.99 MB
12/bin/sh -c wget -nv --no-check-certificate10.65 MB
13ADD file ... in . 154.67 MB
14/bin/sh -c rpm -Uvh jdk-17_linux-x64_bin.rpm178.77 MB
15/bin/sh -c wget -nv --no-check-certificate11.65 MB
16/bin/sh -c wget -nv https://github.com/biod/sambamba/releases/download/v0.8.1/sambamba-0.8.1-linux-amd64-static.gz1.66 MB
17ENV BBTOOLS_VERSION=39.010 B
18ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/bin/:/bbmap/0 B
19ENV SAMTOOLS_VERSION=1.150 B
20/bin/sh -c stats.sh in=bbmap/resources/phix174_ill.ref.fa.gz &&162 B
21MAINTAINER Bryce Foster <[email protected]>0 B
22ARG BLASTV=2.13.00 B
23|1 BLASTV=2.13.0 /bin/sh -c yum799.57 MB
24ADD dir:ff206ec32a1580efa68ef09cbcd4bdf6ac5f4979dcec3d63908993bc2f272399 in /jgi-rqc-pipeline/ 46.97 MB
25ADD file ... in Miniconda3.sh 72.91 MB
26ADD file ... in R-packages.sh 290 B
27|1 BLASTV=2.13.0 /bin/sh -c /bin/bash160.55 MB
28|1 BLASTV=2.13.0 /bin/sh -c /bin/bash826.87 MB
29|1 BLASTV=2.13.0 /bin/sh -c wget230.46 MB
30ENV PATH=/rqc-env/bin:/ncbi-blast-2.13.0+/bin:/minimap2://usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/bin/:/bbmap/0 B
31ENV RQC_ENV=docker0 B

Command

ADD file:805cb5e15fb6e0bb0326ca33fd2942e068863ce2a8491bb71522c652f31fb466 in /