sha256:9d939316e924f92a7a27cbb61f84a3c7e65a36bb530a708043796adbd31b2107
OS/ARCH
linux/amd64
Compressed size
6.94 GB
Last pushed
over 1 year by pichuan
Type
Image
Manifest digest
sha256:9d939316e924f92a7a27cbb61f84a3c7e65a36bb530a708043796adbd31b2107
Image Layers
1ARG RELEASE0 B2ARG LAUNCHPAD_BUILD_ARCH0 B3LABEL org.opencontainers.image.ref.name=ubuntu0 B4LABEL org.opencontainers.image.version=22.040 B5ADD file ... in / 29.03 MB6CMD ["/bin/bash"]0 B7ARG DV_GPU_BUILD0 B8ARG VERSION_DEEPSOMATIC0 B9ARG PYTHON_VERSION0 B10ARG TF_ENABLE_ONEDNN_OPTS0 B11ENV DV_GPU_BUILD=00 B12ENV VERSION_DEEPSOMATIC=1.8.00 B13ENV PYTHON_VERSION=3.100 B14ENV TF_ENABLE_ONEDNN_OPTS=10 B15WORKDIR /opt/0 B16COPY file:4d7bb8559596cbe57787e5fa1da079cd454cbc46985be3d025f317ecda662fa3 in . 21.98 KB17WORKDIR /opt/deepvariant/bin/167 B18COPY dir:94a544319ab81415dd81b9803a6f053e0c9c7ab108eb333ee1f606ac824cccb1 in /opt/conda 228.27 MB19COPY file:b872899b78fcbebbadbd9d2599f9c22f9ebfe673a532114a47ecb7145cb3b6fe in . 4.68 KB20COPY file:302e27b40c45efa6eaeb10cbd94081adc73702c088120c4d6623d16bbedfefe6 in . 2.85 KB21COPY file:24ebe88d2ceb066a10b79dd0214e284468656040e2096c6846f62422754a5a87 in . 9.05 MB22COPY file:6d84d287b2b6c4fbf461ab749073de0df6692c864068805a7b24255c48193778 in . 8.97 MB23COPY file:ff325591b0dc92137175c49874f94d703d4686a320543c3f32e0636798861449 in . 8.96 MB24COPY file:457e52f5b4d41a56dfa4879b549c9e63d5cc9a35e2dd0d092de3fc6ef4613a0b in . 8.89 MB25COPY file:5042bc5c21cff40e68dadd1545a83d158127e353b27a0928a8f044ff36dc0824 in . 8.89 MB26COPY file:6d239aa300dd0a318c5c64025c528c7fa2002c7706317b2e00797ff00b664cf4 in . 133.92 KB27COPY file:0894984bb323d87f1b8c0ad5c836a296733eff2ee33af85cb83bdaf52defb17b in ./deepsomatic/ 8.32 KB28/bin/sh -c ./run-prereq.sh2.09 GB29/bin/sh -c update-alternatives --install /usr/bin/python31.46 KB30/bin/sh -c BASH_HEADER='#!/bin/bash' && 451 B31WORKDIR /opt/models/deepsomatic/wgs184 B32ADD e578db333cd5d43594bdcccb3f9a04b0d27db4742f5a8e063d3f5082f71e4b9e in . 281 B33ADD 2e0e7e64860e9ee58044179916399e8c58210838bcb789458a28712f2fba4221 in . 341.95 KB34ADD 50ed3b4bacce9b3aef59d0bb9ffaa56cd81e046a5cc00d0e04ba5aeff9282559 in . 273 B35WORKDIR /opt/models/deepsomatic/wgs/variables209 B36ADD 22076a35f166245a1109a3654089fa5619fd1bf78c986489a885d759022f2dd1 in . 76.22 MB37ADD a3f223f97b0e5bf5d41302d78ee98eb9687941c90856de581bd5ea1174fcad92 in . 5.99 KB38/bin/sh -c chmod -R +r76.56 MB39WORKDIR /opt/models/deepsomatic/wes188 B40ADD 002a4cd8e3b47732cd544fd960e110e4ee4f7ba3527d25141662c86c297001b2 in . 291 B41ADD 2e0e7e64860e9ee58044179916399e8c58210838bcb789458a28712f2fba4221 in . 341.96 KB42ADD 50ed3b4bacce9b3aef59d0bb9ffaa56cd81e046a5cc00d0e04ba5aeff9282559 in . 276 B43WORKDIR /opt/models/deepsomatic/wes/variables209 B44ADD eb6ec92b1bf2bf49bc954efd35606e33e6dd794c6592d4187bef6597b8be3fe7 in . 77.58 MB45ADD eac89f92611d5bdf435a6a9e73836e52a5f24ac0b67bb0d7d9a004aa006c3d58 in . 5.97 KB46/bin/sh -c chmod -R +r77.92 MB47WORKDIR /opt/models/deepsomatic/pacbio191 B48ADD 59c5129612e9bc6e381afdd2443c5c34a85f42ef588863cc07cf19c74fb49445 in . 293 B49ADD 835fdcdb63a742abd8a587e28bc6db3e685cdc830143ed24b26a86d391145f3a in . 341.73 KB50ADD bb374f8a2d1b4d901fd3875ba160dd97c46136a7583389d3a192e78ec686a8f7 in . 282 B51WORKDIR /opt/models/deepsomatic/pacbio/variables212 B52ADD a641ef6d50f44c3eeaf8336e0ad4b24eb47714450c0cd6641a988ed97d358eea in . 76.43 MB53ADD 105ac0aac8290ff483ad6fe6ab4cf76330769149c8b070801f24a187412b7324 in . 6.03 KB54/bin/sh -c chmod -R +r76.77 MB55WORKDIR /opt/models/deepsomatic/ont188 B56ADD f74c48917765467882186fff5102c19a9897f6e6da27885d72d6685675a5fbd4 in . 287 B57ADD 835fdcdb63a742abd8a587e28bc6db3e685cdc830143ed24b26a86d391145f3a in . 341.72 KB58ADD bb374f8a2d1b4d901fd3875ba160dd97c46136a7583389d3a192e78ec686a8f7 in . 278 B59WORKDIR /opt/models/deepsomatic/ont/variables210 B60ADD abec04eb910c2bfb472f66faf94814c1a9782979d073fcb434ac20238e298cbc in . 76.12 MB61ADD d26056d2edbdd2d6345beac92ef4a35483039221ce3b427e78abbdeb38fb0915 in . 6.01 KB62/bin/sh -c chmod -R +r76.46 MB63WORKDIR /opt/models/deepsomatic/ffpe_wgs192 B64ADD 66404d1249303ab4027c6299403222b1d906bacff1d0e9b3846a0c09643db800 in . 314 B65ADD 023e07f8f098a794a327e71d1c4baa4779e9a4b2d0dc41d0ddacac5716aa18ad in . 342.03 KB66ADD e86927867d47d17fcc4483eacd054da3419417891474d4f1f171138fa1e9d820 in . 283 B67WORKDIR /opt/models/deepsomatic/ffpe_wgs/variables217 B68ADD 4ba74dbc3535409ffa0c8b608f71a77be1988b3ef1f71b69aff5f42acd4b91e2 in . 78.51 MB69ADD a34758659cde521fba469a871cfc933e24dc105b7e11cbd669a17c4ff8c4c4d6 in . 6 KB70/bin/sh -c chmod -R +r78.85 MB71WORKDIR /opt/models/deepsomatic/ffpe_wes195 B72ADD c48d90403583291028459e22d00fcbb0cdb667e2d24dd92f6c5f6999578c7fbc in . 314 B73ADD 023e07f8f098a794a327e71d1c4baa4779e9a4b2d0dc41d0ddacac5716aa18ad in . 342.03 KB74ADD e86927867d47d17fcc4483eacd054da3419417891474d4f1f171138fa1e9d820 in . 281 B75WORKDIR /opt/models/deepsomatic/ffpe_wes/variables214 B76ADD bafba8eaf6117f4ba556ad11b34768f1860f366c5fa29eff418ac387fae44840 in . 78.58 MB77ADD 8a9106917bcd8bedda6127f1a015e2fa4a3eeb4b98cf5cccfae8eeaf19688d9c in . 5.98 KB78/bin/sh -c chmod -R +r78.92 MB79/bin/sh -c mkdir -p /opt/models/deepsomatic/ffpe_wgs_tumor_only/variables77.48 MB80/bin/sh -c mkdir -p /opt/models/deepsomatic/ffpe_wes_tumor_only/variables77.47 MB81WORKDIR /opt/models/deepsomatic/wgs_tumor_only199 B82ADD 63983bf99243c10a1454748ea4760242512378c3662723f4e56e9bf02ab249ef in . 300 B83ADD d5371e35d9007dc032232cc5d65d9bc846a533b9b14a61eca2b89aaf168ee24a in . 341.74 KB84ADD 8e86459f02e4ceefa65576ca7dec690612255aa60a01fe0636c2278d6d1813b3 in . 284 B85WORKDIR /opt/models/deepsomatic/wgs_tumor_only/variables221 B86ADD 2827654926dcc8b395c5f3d9bdd83bb1f53eb2a6e4cf61fe67c2471a46e3d609 in . 77.14 MB87ADD 8f2121715c2787bc2ba9d784b6d4d08bc36226201ae2121d8284b34e7fc612ee in . 6.02 KB88/bin/sh -c chmod -R +r77.48 MB89WORKDIR /opt/models/deepsomatic/pacbio_tumor_only202 B90ADD b7981000f52c0f0d3885179854232fbb144497eeed9535c978bad13a721bb1e8 in . 301 B91ADD f65b57c196c0695b407eab54f2e670b99f04e2bec70246cd170d2e93c12f81e1 in . 341.35 KB92ADD 5d57f1fb6a0967775d8c8cd1cdf36a384b7226577f1a84320dc4c1dacdf069aa in . 291 B93WORKDIR /opt/models/deepsomatic/pacbio_tumor_only/variables226 B94ADD 97a44b98e873a0c335b144a148a771b500594d678419640ee9e4e966ca1248bb in . 76.36 MB95ADD b5dd86d92180a83dbd65c60ad7085e7bfb8543727fdb92e8ab84d8dd1b1a9582 in . 5.99 KB96/bin/sh -c chmod -R +r76.7 MB97WORKDIR /opt/models/deepsomatic/ont_tumor_only200 B98ADD 4fac299a64394fb2ebaa09d0d3375adac08d0f8469b1c01c7b1990c5808fe8d4 in . 303 B99ADD f65b57c196c0695b407eab54f2e670b99f04e2bec70246cd170d2e93c12f81e1 in . 341.35 KB100ADD 5d57f1fb6a0967775d8c8cd1cdf36a384b7226577f1a84320dc4c1dacdf069aa in . 288 B101WORKDIR /opt/models/deepsomatic/ont_tumor_only/variables221 B102ADD a9e157773d2f7df3adbeeeaf2157dca7f11a9ea1f828886c4546d34116b3ff77 in . 76.58 MB103ADD 95c68bb78700d1e5ced49675fe82cf4d4cf26a0eb91574a5e66e92683b129f49 in . 6.03 KB104/bin/sh -c chmod -R +r76.92 MB105WORKDIR /opt/models/deepsomatic/pons190 B106ADD 101c5c18a6f1bd06aed941b5d4d93fc5baa4cac7fa5da56ad37dce0b70bccbf5 in . 110.76 MB107ADD d574593a8fbce0080b0019daab444969bcf591ce823887f5afc0314d4fea2dd0 in . 1.53 MB108ADD 74e11eb2dd51a4ca3a690ee9d0291085a95c8edc56658b916c24bb0fa9230ba1 in . 253.83 MB109ADD 0a102ff9d8c26ba104d7bdc5ea335acb908314bb66701756682e7a2f2ca7ff93 in . 1.6 MB110ADD a94c67dbef012a43cf9c22f246348f94ddf3ecbbc3352636b7e05ea7c96d26a4 in . 570.69 MB111ADD 6aef6c1ee70582abba00adf8482d1f0c9ace46de0492c4799e9569554a73a68c in . 1.67 MB112ADD c0a8769339d9830c78f611341d190a8bb822713146db843e5538c5d7a7250364 in . 599.87 MB113ADD f2b0a868805ddcd8c621becfb8979056d1d0e44e62809950d148350c78469bf3 in . 1.69 MB114/bin/sh -c chmod -R +r1.51 GB115ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/opt/conda/envs/bio/bin:/opt/deepvariant/bin/deepsomatic:/opt/deepvariant/bin0 B116/bin/sh -c apt-get -y update35.64 MB117WORKDIR /opt/deepvariant0 B118CMD ["/opt/deepvariant/bin/deepsomatic/run_deepsomatic" "--help"]0 BCommand
ARG RELEASE