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iarcbioinfo/imputation-nf:v1.1

Machine learning & AI
Data science
Manifest digest

sha256:d543e1cc964426a21b606cc9f6357238f9afe297b1539bf1adb93398a3012348

OS/ARCH

linux/amd64

Compressed size

4.29 GB

Last pushed

over 5 years by iarcbioinfo

Type

Image

Manifest digest

sha256:d543e1cc964426a21b606cc9f6357238f9afe297b1539bf1adb93398a3012348

Image Layers

Image Layers

1ADD file ... in / 25.84 MB
2CMD ["bash"]0 B
3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
4ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
5/bin/sh -c apt-get update --fix-missing76.37 MB
6/bin/sh -c wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-4.7.12-Linux-x86_64.sh48.8 MB
7CMD ["/bin/bash"]0 B
8LABEL base_image=continuumio/miniconda30 B
9LABEL version=4.7.120 B
10LABEL software=Imputation-nf0 B
11LABEL software.version=1.00 B
12LABEL about.summary=Container image containing0 B
13LABEL about.home=http://github.com/IARCbioinfo/Imputation-nf0 B
14LABEL about.documentation=http://github.com/IARCbioinfo/Imputation-nf/README.md0 B
15LABEL about.license_file=http://github.com/IARCbioinfo/Imputation-nf/LICENSE.txt0 B
16LABEL about.license=GNU-3.00 B
17COPY file:bcd5749be96eb1d42df4e3935fe3ae43b71e4a13cce121b87979d8929c66fe36 in / 377 B
18/bin/sh -c apt-get update &&13.95 MB
19/bin/sh -c conda env create1.29 GB
20/bin/sh -c apt-get install -y739.91 KB
21/bin/sh -c apt-get install -y463.92 KB
22/bin/sh -c apt-get install -y116.69 MB
23/bin/sh -c pip install cget578.14 KB
24/bin/sh -c git clone https://github.com/statgen/Minimac4.git41.41 MB
25/bin/sh -c wget https://data.broadinstitute.org/alkesgroup/Eagle/downloads/Eagle_v2.4.1.tar.gz214.91 MB
26/bin/sh -c tar xvzf Eagle_v2.4.1.tar.gz214.9 MB
27/bin/sh -c rm Eagle_v2.4.1.tar.gz109 B
28/bin/sh -c curl -sL imputationbot.now.sh2.25 GB
29/bin/sh -c cp imputationbot /usr/local/bin298 B
30/bin/sh -c cp imputationbot.jar /usr/local/bin2.88 MB
31ENV PATH=/opt/conda/envs/Imputation-nf/bin:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
32ENV PATH=/opt/conda/envs/Imputation-nf/bin:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/Eagle_v2.4.10 B
33ENV PATH=/opt/conda/envs/Imputation-nf/bin:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/Eagle_v2.4.1:/Minimac4/release-build0 B

Command

ADD file:1901172d26545609083e48b9bfaf2cb46674f37af0902ad5a32e2420301225de in /