mcovarr/genomes-in-the-cloud:2.2.5-1489182032

Manifest digest

sha256:aa3d93d0ecce18db618c0c3a8dd70d51d66d410dae9186292711089e3fa8f993

OS/ARCH

linux/amd64

Compressed size

819.54 MB

Last pushed

over 9 years by mcovarr

Type

Image

Manifest digest

sha256:aa3d93d0ecce18db618c0c3a8dd70d51d66d410dae9186292711089e3fa8f993

Image Layers

1ADD file ... in / 48.98 MB

2CMD ["/bin/bash"]0 B

3/bin/sh -c apt-get update &&17.68 MB

4/bin/sh -c apt-get update &&553.55 KB

5/bin/sh -c echo 'deb http://deb.debian.org/debian213 B

6ENV LANG=C.UTF-80 B

7/bin/sh -c { echo '#!/bin/sh';241 B

8ENV JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64/jre0 B

9ENV JAVA_VERSION=8u1210 B

10ENV JAVA_DEBIAN_VERSION=8u121-b13-1~bpo8+10 B

11ENV CA_CERTIFICATES_JAVA_VERSION=20161107~bpo8+10 B

12/bin/sh -c set -x &&51.04 MB

13/bin/sh -c /var/lib/dpkg/info/ca-certificates-java.postinst configure282.26 KB

14MAINTAINER DSDE <[email protected]>0 B

15ENV TERM=xterm-256color0 B

16ENV DOCKER_FIX= 0 B

17LABEL GOTC_PICARD_VER=1.11500 B

18LABEL GOTC_GATK34_VER=3.4-g3c929b00 B

19LABEL GOTC_GATK35_VER=3.5-0-g36282e40 B

20LABEL GOTC_GATK36_VER=3.6-44-ge7d1cd20 B

21LABEL GOTC_GATK4_VER=4.alpha-249-g7df40440 B

22LABEL GOTC_SAMTOOLS_VER=1.3.10 B

23LABEL GOTC_BWA_VER=0.7.15.r11400 B

24LABEL GOTC_TABIX_VER=0.2.5_r10050 B

25LABEL GOTC_BGZIP_VER=1.30 B

26LABEL GOTC_SVTOOLKIT_VER=2.00-16500 B

27WORKDIR /usr/gitc112 B

28/bin/sh -c apt-get update &&231.41 MB

29/bin/sh -c echo 'install.packages(c("ggplot2"), repos="http://cran.us.r-project.org",73.81 MB

30/bin/sh -c wget 'https://github.com/samtools/samtools/releases/download/1.3.1/samtools-1.3.1.tar.bz2' -O1.43 MB

31/bin/sh -c wget 'https://github.com/lh3/bwa/releases/download/v0.7.15/bwakit-0.7.15_x64-linux.tar.bz2' -O170.31 KB

32COPY dir:43f41ad1fd29e55b1e73f818f8c82e988bd8914cc909c4e175b136c403f0fe6b in . 394.21 MB

Command

ADD file:41ac8d85ee35954bf6c8353d9681a045ba260aa9a96dbbded7bcd6e37ee49bea in /