mcovarr/genomes-in-the-cloud:2.2.5-1489187750

Manifest digest

sha256:33aa12f2f6d7b80aa601058b99244e76323bde084d19d5c2275058adff397b79

OS/ARCH

linux/amd64

Compressed size

952.44 MB

Last pushed

over 9 years by mcovarr

Type

Image

Manifest digest

sha256:33aa12f2f6d7b80aa601058b99244e76323bde084d19d5c2275058adff397b79

Image Layers

1ADD file ... in / 42.2 MB

2CMD ["/bin/bash"]0 B

3/bin/sh -c apt-get update &&20.17 MB

4/bin/sh -c apt-get update &&612.66 KB

5/bin/sh -c echo 'deb http://deb.debian.org/debian214 B

6ENV LANG=C.UTF-80 B

7/bin/sh -c { echo '#!/bin/sh';242 B

8ENV JAVA_HOME=/usr/lib/jvm/java-9-openjdk-amd640 B

9ENV JAVA_VERSION=9~b1590 B

10ENV JAVA_DEBIAN_VERSION=9~b159-10 B

11/bin/sh -c set -x &&147.77 MB

12MAINTAINER DSDE <[email protected]>0 B

13ENV TERM=xterm-256color0 B

14ENV DOCKER_FIX= 0 B

15LABEL GOTC_PICARD_VER=1.11500 B

16LABEL GOTC_GATK34_VER=3.4-g3c929b00 B

17LABEL GOTC_GATK35_VER=3.5-0-g36282e40 B

18LABEL GOTC_GATK36_VER=3.6-44-ge7d1cd20 B

19LABEL GOTC_GATK4_VER=4.alpha-249-g7df40440 B

20LABEL GOTC_SAMTOOLS_VER=1.3.10 B

21LABEL GOTC_BWA_VER=0.7.15.r11400 B

22LABEL GOTC_TABIX_VER=0.2.5_r10050 B

23LABEL GOTC_BGZIP_VER=1.30 B

24LABEL GOTC_SVTOOLKIT_VER=2.00-16500 B

25WORKDIR /usr/gitc111 B

26/bin/sh -c apt-get update &&290.27 MB

27/bin/sh -c echo 'install.packages(c("ggplot2"), repos="http://cran.us.r-project.org",55.59 MB

28/bin/sh -c wget 'https://github.com/samtools/samtools/releases/download/1.3.1/samtools-1.3.1.tar.bz2' -O1.48 MB

29/bin/sh -c wget 'https://github.com/lh3/bwa/releases/download/v0.7.15/bwakit-0.7.15_x64-linux.tar.bz2' -O170.31 KB

30COPY dir:1abda2518149a70706f9ca8c2387ae59811b97f074d1d0cf555f62a3e335bf21 in . 394.21 MB

Command

ADD file:976136a811110184c7ff305b3354fc765d3d21ce0d7ce86eee8900a231e0e38a in /