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pennlinc/xcp_d_build:0.0.6rc11

Machine learning & AI
Data science
Manifest digest

sha256:ab05335149b4c390773a98d84e916f260d2204108f85161fffcf2920d904e752

OS/ARCH

linux/amd64

Compressed size

5.01 GB

Last pushed

over 3 years by tsalo

Type

Image

Manifest digest

sha256:ab05335149b4c390773a98d84e916f260d2204108f85161fffcf2920d904e752

Image Layers

Image Layers

1ADD file ... in / 25.47 MB
2CMD ["bash"]0 B
3COPY docker/files/neurodebian.gpg /usr/local/etc/neurodebian.gpg # buildkit3.33 KB
4RUN /bin/sh -c apt-get update216.21 MB
5ENV OS=Linux FIX_VERTEX_AREA=0 B
6RUN /bin/sh -c echo "Downloading45.88 MB
7ENV C3DPATH=/opt/c3d/bin PATH=/opt/c3d/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
8RUN /bin/sh -c curl -sSL3.2 KB
9RUN /bin/sh -c curl -sSLO176.18 MB
10ENV PATH=/usr/local/miniconda/bin:/opt/c3d/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin CPATH=/usr/local/miniconda/include: LANG=C.UTF-8 LC_ALL=C.UTF-80 B
11RUN /bin/sh -c conda install640.83 MB
12RUN /bin/sh -c apt-get update140.41 MB
13COPY /usr/lib/fsl/5.0/slicer /opt/fsl/lib/slicer # buildkit13.61 KB
14COPY /usr/lib/fsl/5.0/slicesdir /opt/fsl/lib/slicesdir # buildkit2.47 KB
15COPY /usr/lib/fsl/5.0/pngappend /opt/fsl/lib/pngappend # buildkit6.13 KB
16COPY /usr/lib/fsl/5.0/remove_ext /opt/fsl/lib/remove_ext # buildkit1.84 KB
17COPY /usr/bin/fsl5.0-slicer /opt/fsl/bin/fsl-5.0-slicer # buildkit881 B
18COPY /usr/bin/fsl5.0-slicesdir /opt/fsl/bin/fsl5.0-slicesdir # buildkit858 B
19COPY /usr/bin/fsl5.0-pngappend /opt/fsl/bin/fsl5.0-pngappend # buildkit858 B
20COPY /usr/bin/fsl5.0-remove_ext /opt/fsl/bin/fsl5.0-remove_ext # buildkit859 B
21COPY /usr/lib/fsl/5.0/libnewimage.so /opt/fsl/lib/libnewimage.so # buildkit436.57 KB
22COPY /usr/lib/fsl/5.0/libmiscmaths.so /opt/fsl/lib/libmiscmaths.so # buildkit215.33 KB
23COPY /usr/share/fsl/5.0/bin/slicer /opt/fsl/bin/slicer # buildkit13.59 KB
24COPY /usr/share/fsl/5.0/bin/slicesdir /opt/fsl/bin/slicesdir # buildkit2.46 KB
25COPY /usr/share/fsl/5.0/bin/pngappend /opt/fsl/bin/pngappend # buildkit6.14 KB
26COPY /usr/share/fsl/5.0/bin/remove_ext /opt/fsl/bin/remove_ext # buildkit1.84 KB
27ENV FSLDIR=/opt/fsl FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE FSLLOCKDIR=0 B
28RUN /bin/sh -c curl -sSL2.76 GB
29ENV FREESURFER_HOME=/opt/freesurfer FSF_OUTPUT_FORMAT=nii.gz0 B
30ENV FUNCTIONALS_DIR=/opt/freesurfer/sessions LOCAL_DIR=/opt/freesurfer/local MINC_BIN_DIR=/opt/freesurfer/mni/bin MINC_LIB_DIR=/opt/freesurfer/mni/lib0 B
31ENV MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 SUBJECTS_DIR=/opt/freesurfer/subjects PATH=/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/opt/fsl/lib:/opt/fsl/bin:/usr/local/miniconda/bin:/opt/c3d/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
32ENV AFNI_MODELPATH=/usr/lib/afni/models AFNI_IMSAVE_WARNINGS=NO AFNI_TTATLAS_DATASET=/usr/share/afni/atlases AFNI_PLUGINPATH=/usr/lib/afni/plugins0 B
33ENV ANTSPATH=/usr/lib/ants0 B
34RUN /bin/sh -c mkdir -p602.27 MB
35ENV PATH=/usr/lib/ants:/usr/lib/afni/bin:/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/opt/fsl/lib:/opt/fsl/bin:/usr/local/miniconda/bin:/opt/c3d/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
36RUN /bin/sh -c curl -sL29.57 MB
37RUN /bin/sh -c apt-get install387 B
38RUN /bin/sh -c npm install3.03 MB
39RUN /bin/sh -c npm install20.54 MB
40ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
41RUN /bin/sh -c useradd -m4.44 KB
42WORKDIR /home/xcp_d32 B
43ENV HOME=/home/xcp_d0 B
44RUN /bin/sh -c pip install3.39 MB
45RUN /bin/sh -c python -c17.95 KB
46RUN /bin/sh -c pip install205.26 MB
47RUN /bin/sh -c curl -o25.1 MB
48ARG VERSION=0.0.10 B
49RUN |1 VERSION=0.0.1 /bin/sh -c166.98 MB
50RUN |1 VERSION=0.0.1 /bin/sh -c10.23 KB
51WORKDIR /tmp/32 B

Command

ADD file:40290d9a94ae76c35ab1f57178130ce1c5b976e34a91e77472ecf7e945ab64f9 in /