A ready to use pypedia environment http://www.pypedia.com
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This is an image that contains:
The focus on this image is to be able to reproduce analysis and create qualitative figures ready for publishing with the help of methods hosted in the pypedia project.
Dockerfile:
FROM continuumio/anaconda:latest
MAINTAINER Alexandros Kanterakis <[email protected]>
RUN apt-get -y update && apt-get install -y \
git \
gcc \
g++ \
zlibc zlib1g zlib1g-dev \
xpdf \
vim \
texlive-latex-extra \
texlive-latex-base texmaker texlive-fonts-recommended texlive-science texlive-publishers texlive-fonts-extra texlive-math-extra \
dvipng
RUN echo "y" | conda update conda
RUN pip install \
brewer2mpl \
biopython \
pybedtools
RUN git clone https://github.com/kantale/pypedia.git ; cd pypedia; python setup.py install ; cd
CMD ["/bin/bash"]
Content type
Image
Digest
sha256:60e07c30f…
Size
1.7 GB
Last updated
almost 11 years ago
docker pull kantale/pypedia