[{"_1":2,"_155":-5,"_156":-5},"loaderData",{"_3":4,"_13":14,"_21":22,"_134":135},"root",{"_5":-5,"_6":-7,"_7":8,"_9":-7,"_10":11,"_12":-7},"currentUser","primaryEmail","siteVerification","6LeIxAcTAAAAAJcZVRqyHh71UMIEGNQ_MXjiZKhI","toast","enableDev",false,"incidentStatus","routes/_layout",{"_15":-5,"_16":17,"_18":17,"_19":11,"_20":11},"username","isAskGordonEnabled",true,"isUsingNewTemplate","showMinimalLanding","showHoneypotTrap","routes/_layout.r.$namespace.$reponame",{"_23":24,"_25":-5,"_26":11,"_27":11,"_28":29,"_30":31,"_32":-5,"_33":11,"_34":35,"_84":-5,"_85":86,"_125":-5,"_126":11,"_127":17,"_128":11,"_129":-5,"_130":11,"_131":-5,"_132":133},"canonicalUrl","https://hub.docker.com/r/sandip117/pl-dice_coeff/tags","mcpServer","canSeeDockerfile","canSeeAutobuilds","namespace","sandip117","reponame","pl-dice_coeff","cloudBuildSource","isAutobuildsAvailable","repo",{"_36":37,"_38":39,"_41":42,"_43":44,"_45":11,"_46":47,"_48":49,"_50":51,"_53":31,"_28":29,"_54":55,"_56":40,"_57":58,"_59":60,"_61":62,"_63":-5,"_64":58,"_65":66,"_67":11,"_68":29,"_69":70,"_75":11,"_76":77,"_81":29,"_82":83},"categories",[],"content_types",[40],"image","date_registered","2020-04-29T15:42:34.051871Z","description","A plug-in to meassure model accuracy on test data","is_private","last_updated","2020-06-08T20:17:55.16709Z","last_modified","2024-10-16T13:48:34.145251Z","media_types",[52],"application/vnd.docker.container.image.v1+json","name","pull_count",465,"repository_type","star_count",0,"status",1,"status_description","active","source","collaborator_count","full_description","pl-dice_coeff\n================================\n\n.. image:: https://badge.fury.io/py/dice_coeff.svg\n :target: https://badge.fury.io/py/dice_coeff\n\n.. image:: https://travis-ci.org/FNNDSC/dice_coeff.svg?branch=master\n :target: https://travis-ci.org/FNNDSC/dice_coeff\n\n.. image:: https://img.shields.io/badge/python-3.5%2B-blue.svg\n :target: https://badge.fury.io/py/pl-dice_coeff\n\n.. contents:: Table of Contents\n\n\nAbstract\n--------\n\nAn app to calculate model testing accuracy by dice coefficient\n\n\nSynopsis\n--------\n\n.. code::\n\n python dice_coeff.py \\\n [-v ] [--verbosity ] \\\n [--version] \\\n [--man] \\\n [--meta] \\\n [--prediction ] \\\n [--ground_truth ] \\\n \n \n\nDescription\n-----------\n\n``dice_coeff.py`` is a ChRIS-based application that...\n\nArguments\n---------\n\n.. code::\n\n [-v ] [--verbosity ]\n Verbosity level for app. Not used currently.\n\n [--version]\n If specified, print version number. \n \n [--man]\n If specified, print (this) man page.\n\n [--meta]\n If specified, print plugin meta data.\n \n [--prediction ]\n The directory where the predicted images are stored.\n \n [--ground_truth ]\n The directory where the ground truth images are stored.\n\n\nRun\n----\n\nThis ``plugin`` can be run in two modes: natively as a python package or as a containerized docker image.\n\nUsing PyPI\n~~~~~~~~~~\n\nTo run from PyPI, simply do a \n\n.. code:: bash\n\n pip install dice_coeff\n\nand run with\n\n.. code:: bash\n\n dice_coeff.py --man --predition pred --ground_truth gt /tmp /tmp\n\nto get inline help. The app should also understand being called with only two positional arguments\n\n.. code:: bash\n\n dice_coeff.py --prediction pred_dir_name --ground_truth grnd_trh_dir_name /some/input/directory /destination/directory\n\n\nUsing ``docker run``\n~~~~~~~~~~~~~~~~~~~~\n\nTo run using ``docker``, be sure to assign an \"input\" directory to ``/incoming`` and an output directory to ``/outgoing``. *Make sure that the* ``$(pwd)/out`` *directory is world writable!*\n\nNow, prefix all calls with \n\n.. code:: bash\n\n docker run --rm -v $(pwd)/out:/outgoing \\\n fnndsc/pl-dice_coeff dice_coeff.py \\\n\nThus, getting inline help is:\n\n.. code:: bash\n\n mkdir in out && chmod 777 out\n docker run --rm -v $(pwd)/in:/incoming -v $(pwd)/out:/outgoing \\\n fnndsc/pl-dice_coeff dice_coeff.py \\\n --man \\\n --prediction pred \\\n --ground_truth gt \\\n /incoming /outgoing\n\nExamples\n--------\n\n\n\n\n\n","has_starred","hub_user","immutable_tags_settings",{"_71":11,"_72":73},"enabled","rules",[74],".*","is_automated","permissions",{"_78":17,"_79":11,"_80":11},"read","write","admin","user","storage_size",1405947112,"orgData","recentTags",[87],{"_88":40,"_89":90,"_91":92,"_93":94,"_95":96,"_46":114,"_115":90,"_116":29,"_117":52,"_53":118,"_119":120,"_121":105,"_122":114,"_123":62,"_124":17},"content_type","creator",7762265,"full_size",408110697,"id",97970129,"images",[97],{"_98":99,"_100":101,"_102":103,"_104":105,"_106":107,"_108":109,"_110":103,"_111":-5,"_112":92,"_59":62,"_113":-5},"architecture","amd64","digest","sha256:b61c6b39d74de69f87ba9f8978638dc4e9867354a27df0e932d24e9722a83822","features","","last_pulled","2026-09-08T14:22:03.762899068Z","last_pushed","2020-06-08T20:16:17Z","os","linux","os_features","os_version","size","variant","2020-06-08T20:16:17.0842Z","last_updater","last_updater_username","media_type","latest","repository",8940162,"tag_last_pulled","tag_last_pushed","tag_status","v2","sbxKitMetadata","isPotentialSpam","isHubSbxKitsEnabled","showSbxLogoOverride","sbxTrademarkText","displaySecurityMetadata","tagAttestations","tagsHaveAttestations",[],"routes/_layout.r.$namespace.$reponame.tags",{"_34":136,"_143":144,"_132":153,"_154":11},{"_36":137,"_38":138,"_41":42,"_43":44,"_45":11,"_46":47,"_48":49,"_50":139,"_53":31,"_28":29,"_54":55,"_56":40,"_57":58,"_59":60,"_61":62,"_63":-5,"_64":58,"_65":66,"_67":11,"_68":29,"_69":140,"_75":11,"_76":142,"_81":29,"_82":83},[],[40],[52],{"_71":11,"_72":141},[74],{"_78":17,"_79":11,"_80":11},"tags",{"_145":60,"_146":-5,"_147":-5,"_148":149},"count","next","previous","results",[150],{"_88":40,"_89":90,"_91":92,"_93":94,"_95":151,"_46":114,"_115":90,"_116":29,"_117":52,"_53":118,"_119":120,"_121":105,"_122":114,"_123":62,"_124":17},[152],{"_98":99,"_100":101,"_102":103,"_104":105,"_106":107,"_108":109,"_110":103,"_111":-5,"_112":92,"_59":62,"_113":-5},[],"canDeleteTags","actionData","errors"]

sandip117/pl-dice_coeff

Tags for sandip117/pl-dice_coeff